Anchorpoints

Gene id
SB02G039095
Organism
Sorghum bicolor

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G72560PAUSED (PSD); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); Has 688 Blast hits to 667 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 267; Plants - 76; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development. ARM repeat superfamily protein1-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G21620No description available.Bd1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA10G17970CC_gene:LOS1,CC_gene:los1,CC_gene:xpot,CC_gene:XPOT,CC_gene:Xpot,CC_functional_completeness:complete,PRODUCT:Putative Exportin-T,GO:0005488,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G42180exportin 1, putative, expressed Exportin-T7+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_07G34300No description available.Chr07+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G06620No description available.Chr03+View
PT01G16810No description available.Chr01-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI002G39640No description available.scaffold_2-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G122370Exportin-t (AHRD V1 ***- Q7PC79_ARATH)%3B contains Interpro domain(s) IPR016024 Armadillo-type foldch03-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G02320name=GSVIVG01016742001;chr9-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G38820No description available.2+View
ZM07G27060No description available.7+View


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Gene id
Species
Description
Chromosome
Strand