Anchorpoints
- Gene id
- SB02G039095
- Organism
- Sorghum bicolor
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G72560 | PAUSED (PSD); CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); Has 688 Blast hits to 667 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 237; Fungi - 267; Plants - 76; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development. ARM repeat superfamily protein | 1 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD1G21620 | No description available. | Bd1 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA10G17970 | CC_gene:LOS1,CC_gene:los1,CC_gene:xpot,CC_gene:XPOT,CC_gene:Xpot,CC_functional_completeness:complete,PRODUCT:Putative Exportin-T,GO:0005488,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr10 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS07G42180 | exportin 1, putative, expressed Exportin-T | 7 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_07G34300 | No description available. | Chr07 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G06620 | No description available. | Chr03 | + | View |
PT01G16810 | No description available. | Chr01 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI002G39640 | No description available. | scaffold_2 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G122370 | Exportin-t (AHRD V1 ***- Q7PC79_ARATH)%3B contains Interpro domain(s) IPR016024 Armadillo-type fold | ch03 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV09G02320 | name=GSVIVG01016742001; | chr9 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM02G38820 | No description available. | 2 | + | View |
ZM07G27060 | No description available. | 7 | + | View |