Anchorpoints
- Gene id
- SB02G030310
- Organism
- Sorghum bicolor
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB07G025210 | No description available. | chr_7 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G12610 | DWARF AND DELAYED FLOWERING 1 (DDF1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G63030.2); Has 5207 Blast hits to 5205 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5202; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor. | 1 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD4G35570 | No description available. | Bd4 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA03G12620 | CC_gene:CRF1,CC_gene:WIN1,CC_gene:LEP,CC_gene:ERF9,CC_gene:CRF2,CC_gene:ERF4,CC_gene:ERF003,CC_gene:RAP2-11,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS08G43210 | AP2 domain containing protein, expressed Dehydration-responsive element-binding protein 1I | 8 | - | View |
OS09G35010 | Dehydration-responsive element-binding protein 1B dehydration-responsive element-binding protein, putative, expressed | 9 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_09G27820 | Dehydration-responsive element-binding protein 1H | Chr09 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G12120 | No description available. | Chr03 | - | View |
PT14G07670 | No description available. | Chr14 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI007G21080 | No description available. | scaffold_7 | + | View |
SI002G28670 | No description available. | scaffold_2 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G026270 | Ethylene-responsive transcription factor 4 (AHRD V1 *-** ERF78_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch03 | + | View |
SL08G007820 | Ethylene-responsive transcription factor 10 (AHRD V1 *-** ERF77_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch08 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV02G07270 | name=GSVIVG01019860001; | chr2 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM01G34610 | dehydration-responsive element-binding protein 1B | 1 | - | View |
ZM02G33880 | CBF3-like protein | 2 | - | View |
ZM07G19730 | No description available. | 7 | - | View |
ZM01G19480 | No description available. | 1 | + | View |