Anchorpoints
- Gene id
- SB01G049520
- Organism
- Sorghum bicolor
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB06G025770 | No description available. | chr_6 | + | View |
SB07G025140 | No description available. | chr_7 | + | View |
SB02G030450 | No description available. | chr_2 | - | View |
SB01G031210 | No description available. | chr_1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G23070 | RHOMBOID-like protein 7 (RBL7); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: root, pollen tube; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 6 (TAIR:AT1G12750.3); Has 5309 Blast hits to 5308 proteins in 1628 species: Archae - 134; Bacteria - 3233; Metazoa - 520; Fungi - 126; Plants - 324; Viruses - 0; Other Eukaryotes - 972 (source: NCBI BLink). RHOMBOID-like protein 7 | 4 | - | View |
AT1G63120 | AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein. RHOMBOID-like 2 (RBL2); CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 6 (TAIR:AT1G12750.3); Has 6856 Blast hits to 6855 proteins in 1947 species: Archae - 152; Bacteria - 4411; Metazoa - 521; Fungi - 179; Plants - 374; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink). RHOMBOID-like 2 | 1 | - | View |
AT5G07250 | RHOMBOID-like protein 3 RHOMBOID-like protein 3 (RBL3); FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 2 (TAIR:AT1G63120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD5G18750 | No description available. | Bd5 | + | View |
BD1G77450 | No description available. | Bd1 | - | View |
BD4G35740 | No description available. | Bd4 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00074G00720 | No description available. | supercontig_74 | + | View |
CP00107G00230 | No description available. | supercontig_107 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA05G20620 | CC_functional_completeness:fragment,PRODUCT:OsRhmbd16 - Putative Rhomboid homologue%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr5 | + | View |
MA11G22300 | CC_gene:RHBDF1,CC_gene:Rhbdf1,CC_gene:rhbdf1,CC_functional_completeness:complete,PRODUCT:OsRhmbd16 - Putative Rhomboid homologue%2C expressed,GO:0016021,GO:0004252,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.4.21.105 | chr11 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS08G43320 | OsRhmbd14 - Putative Rhomboid homologue, expressed | 8 | - | View |
OS10G37760 | OsRhmbd17 - Putative Rhomboid homologue, expressed | 10 | + | View |
OS03G02530 | OsRhmbd7 - Putative Rhomboid homologue, expressed | 3 | + | View |
OS04G48130 | OsRhmbd11 - Putative Rhomboid homologue, expressed | 4 | + | View |
OS09G35730 | OsRhmbd16 - Putative Rhomboid homologue, expressed | 9 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_10G28160 | No description available. | Chr10 | + | View |
OSINDICA_09G28020 | No description available. | Chr09 | - | View |
OSINDICA_04G40280 | No description available. | Chr04 | + | View |
OSINDICA_03G01550 | No description available. | Chr03 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT12G13960 | No description available. | Chr12 | + | View |
PT01G10870 | No description available. | Chr01 | + | View |
PT03G12290 | No description available. | Chr03 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI009G36090 | No description available. | scaffold_9 | - | View |
SI002G28830 | No description available. | scaffold_2 | - | View |
SI007G20930 | No description available. | scaffold_7 | + | View |
SI009G58710 | No description available. | scaffold_9 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G080500 | Rhomboid family protein (AHRD V1 ***- D7M0H4_ARALY)%3B contains Interpro domain(s) IPR002610 Peptidase S54%2C rhomboid | ch08 | - | View |
SL03G026080 | Rhomboid family protein (AHRD V1 **-- D7M0H4_ARALY)%3B contains Interpro domain(s) IPR002610 Peptidase S54%2C rhomboid | ch03 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV02G07010 | name=GSVIVG01019824001; | chr2 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM01G19370 | No description available. | 1 | + | View |
ZM01G01040 | No description available. | 1 | + | View |
ZM07G19910 | No description available. | 7 | + | View |