Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- SB01G038520
- Organism
- Sorghum bicolor
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB08G000410 | No description available. | chr_8 | + | View |
| SB09G002350 | No description available. | chr_9 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G05600 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: response to salt stress, response to karrikin; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G11180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 5 | + | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD2G38220 | No description available. | Bd2 | - | View |
| BD2G54090 | No description available. | Bd2 | + | View |
| BD1G65590 | No description available. | Bd1 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA07G15950 | CC_gene:LDOX,CC_gene:NCS1,CC_gene:ANS,CC_gene:FL,CC_gene:FLS,CC_gene:SRG1,CC_functional_completeness:complete,PRODUCT:Putative Protein SRG1,GO:0016491,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.14.11.9 | chr7 | - | View |
| MA06G33770 | CC_gene:ACO2,CC_gene:NCS1,CC_gene:FHT,CC_gene:At1g06620,CC_gene:SRG1,CC_functional_completeness:complete,PRODUCT:Putative Protein SRG1,GO:0016491,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.14.11.9 | chr6 | - | View |
| MA09G04550 | CC_gene:ACO1,CC_gene:ACO,CC_gene:FLS,CC_gene:ACO4,CC_gene:SRG1,CC_gene:ACO2,CC_functional_completeness:complete,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase 2,GO:0016491,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.14.11.9 | chr9 | + | View |
| MA10G13400 | CC_gene:At4g21690,CC_gene:GA4,CC_gene:At1g80330,CC_gene:20ox1,CC_gene:SRG1,CC_gene:GA2OX1,CC_gene:GA2OX7,CC_functional_completeness:complete,PRODUCT:Putative Gibberellin 2-beta-dioxygenase 8,GO:0016491,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.14.11.15 | chr10 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS01G61610 | flavonol synthase/flavanone 3-hydroxylase, putative, expressed | 1 | + | View |
| OS05G03640 | flavonol synthase/flavanone 3-hydroxylase, putative, expressed | 5 | - | View |
| OS03G18030 | leucoanthocyanidin dioxygenase, putative, expressed | 3 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_01G58280 | No description available. | Chr01 | + | View |
| OSINDICA_05G02610 | No description available. | Chr05 | - | View |
| OSINDICA_03G16660 | No description available. | Chr03 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT16G11710 | No description available. | Chr16 | - | View |
| PT10G18800 | No description available. | Chr10 | + | View |
| PT08G06930 | No description available. | Chr08 | - | View |
| PT06G10110 | No description available. | Chr06 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI009G45450 | No description available. | scaffold_9 | + | View |
| SI003G04950 | No description available. | scaffold_3 | - | View |
| SI005G37770 | No description available. | scaffold_5 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL10G076660 | Anthocyanidin synthase (AHRD V1 **-- Q2QCX4_GOSHI)%3B contains Interpro domain(s) IPR005123 Oxoglutarate and iron-dependent oxygenase | ch10 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV13G10370 | name=GSVIVG01032809001; | chr13 | - | View |
| VV08G00340 | name=GSVIVG01011165001; | chr8 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM08G32430 | No description available. | 8 | - | View |
| ZM09G23210 | No description available. | 9 | + | View |
| ZM01G12260 | No description available. | 1 | - | View |