Anchorpoints

Gene id
SB01G003190
Organism
Sorghum bicolor

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SB01G039615No description available.chr_1-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G02400Encodes a protein with similarity to the POL locus which is a novel protein phosphatase 2C. Ubiquitously expressed. No phenotype observed in homozygous null mutant background. pol-like 2 pol-like 2 (PLL2); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 3 (TAIR:AT3G09400.1); Has 2790 Blast hits to 2760 proteins in 242 species: Archae - 0; Bacteria - 6; Metazoa - 446; Fungi - 298; Plants - 1599; Viruses - 17; Other Eukaryotes - 424 (source: NCBI BLink).5+View
AT1G07630pol-like 5 (PLL5); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: poltergeist like 4 (TAIR:AT2G28890.1); Has 2889 Blast hits to 2855 proteins in 251 species: Archae - 0; Bacteria - 18; Metazoa - 486; Fungi - 220; Plants - 1762; Viruses - 0; Other Eukaryotes - 403 (source: NCBI BLink). Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves. pol-like 51+View
AT2G28890poltergeist like 4 Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves. poltergeist like 4 (PLL4); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation, leaf development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: pol-like 5 (TAIR:AT1G07630.1); Has 2844 Blast hits to 2809 proteins in 262 species: Archae - 0; Bacteria - 50; Metazoa - 567; Fungi - 230; Plants - 1630; Viruses - 0; Other Eukaryotes - 367 (source: NCBI BLink).2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G03690No description available.Bd1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA02G16720CC_gene:Os05g0111800,CC_gene:Os02g0690500,CC_gene:Os03g0275100,CC_gene:PLL3,CC_gene:PLL2,CC_gene:XB15,CC_gene:PLL4,CC_gene:PLL5,CC_functional_completeness:complete,PRODUCT:Probable protein phosphatase 2C 4,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.1.3.16chr2-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G60650Protein phosphatase 2C 35 protein phosphatase 2C, putative, expressed3-View
OS03G16760protein phosphatase 2C, putative, expressed Probable protein phosphatase 2C 313+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G57860No description available.Chr03-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G08500No description available.Chr06-View
PT09G03060No description available.Chr09-View
PT01G23930No description available.Chr01-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G03220No description available.scaffold_9+View
SI003G06480No description available.scaffold_3-View
SI009G46660No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G076100Protein phosphatase 2C containing protein (AHRD V1 *-*- B6T998_MAIZE)%3B contains Interpro domain(s) IPR015655 Protein phosphatase 2Cch06-View
SL09G010780Protein phosphatase 2C containing protein (AHRD V1 *-*- B6T998_MAIZE)%3B contains Interpro domain(s) IPR015655 Protein phosphatase 2Cch09-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G03690name=GSVIVG01024976001;chr6-View
VV08G14610name=GSVIVG01034176001;chr8-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G11290No description available.1+View
ZM01G57900No description available.1-View
ZM05G01490No description available.5+View


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Gene id
Species
Description
Chromosome
Strand