Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT18G12470
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT18G02510 | No description available. | Chr18 | + | View |
| PT06G06430 | No description available. | Chr06 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G20280 | Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted. sucrose phosphate synthase 1F sucrose phosphate synthase 1F (SPS1F); FUNCTIONS IN: sucrose-phosphate synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process, sucrose metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose-phosphate synthase (InterPro:IPR006380), Sucrose phosphate synthase, plant (InterPro:IPR012819), Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: sucrose phosphate synthase 2F (TAIR:AT5G11110.1); Has 9301 Blast hits to 9184 proteins in 1618 species: Archae - 405; Bacteria - 6026; Metazoa - 10; Fungi - 80; Plants - 739; Viruses - 0; Other Eukaryotes - 2041 (source: NCBI BLink). | 5 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G30520 | No description available. | Bd1 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00217G00190 | No description available. | supercontig_217 | - | View |
| CP00046G00590 | No description available. | supercontig_46 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI004G20640 | No description available. | scaffold_4 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL07G007790 | Sucrose phosphate synthase (AHRD V1 **** Q2HYI0_CUCME)%3B contains Interpro domain(s) IPR012819 Sucrose phosphate synthase%2C plant | ch07 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV04G12380 | name=GSVIVG01035882001; | chr4 | - | View |
| VV11G01160 | name=GSVIVG01012825001; | chr11 | - | View |