Anchorpoints
- Gene id
- PT18G11130
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G18800 | No description available. | Chr06 | - | View |
PT06G26210 | No description available. | Chr06 | + | View |
PT18G02130 | No description available. | Chr18 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G31920 | response regulator 10 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. response regulator 10 (RR10); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 12 (TAIR:AT2G25180.1); Has 117582 Blast hits to 116317 proteins in 3081 species: Archae - 744; Bacteria - 104604; Metazoa - 49; Fungi - 620; Plants - 2843; Viruses - 4; Other Eukaryotes - 8718 (source: NCBI BLink). | 4 | - | View |
AT5G58080 | member of Response Regulator: B- Type response regulator 18 response regulator 18 (RR18); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 12 (TAIR:AT2G25180.1); Has 83273 Blast hits to 82938 proteins in 2948 species: Archae - 359; Bacteria - 74242; Metazoa - 38; Fungi - 293; Plants - 2583; Viruses - 2; Other Eukaryotes - 5756 (source: NCBI BLink). | 5 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD1G47400 | No description available. | Bd1 | - | View |
BD3G54120 | No description available. | Bd3 | - | View |
BD1G30810 | No description available. | Bd1 | + | View |
BD3G06120 | No description available. | Bd3 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00046G01190 | No description available. | supercontig_46 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA05G17000 | CC_gene:ARR11,CC_gene:ARR1,CC_gene:ARR18,CC_gene:ARR2,CC_gene:ARR14,CC_gene:ARR10,CC_gene:ARR12,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0000160,GO:0000156,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr5 | - | View |
MA03G13700 | CC_gene:ARR14,CC_gene:ARR11,CC_gene:ARR18,CC_gene:ARR1,CC_gene:ARR10,CC_gene:ARR2,CC_gene:ARR12,CC_functional_completeness:complete,PRODUCT:two-component response regulator%2C putative%2C expressed,GO:0003677,GO:0000160,GO:0000156,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS06G08440 | two-component response regulator, putative, expressed | 6 | + | View |
OS02G08500 | two-component response regulator, putative, expressed | 2 | - | View |
OS06G43910 | two-component response regulator, putative, expressed | 6 | + | View |
OS02G55320 | two-component response regulator, putative, expressed | 2 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_06G07780 | No description available. | Chr06 | + | View |
OSINDICA_02G53540 | No description available. | Chr02 | - | View |
OSINDICA_02G08300 | No description available. | Chr02 | - | View |
OSINDICA_06G39710 | No description available. | Chr06 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB04G035980 | No description available. | chr_4 | - | View |
SB04G005580 | No description available. | chr_4 | - | View |
SB10G005580 | No description available. | chr_10 | + | View |
SB10G025490 | No description available. | chr_10 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI004G05140 | No description available. | scaffold_4 | - | View |
SI001G36700 | No description available. | scaffold_1 | - | View |
SI004G20310 | No description available. | scaffold_4 | - | View |
SI001G06460 | No description available. | scaffold_1 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G005140 | Response regulator 9 (AHRD V1 ***- Q94LW1_MAIZE)%3B contains Interpro domain(s) IPR017053 Response regulator%2C plant B-type | ch07 | + | View |
SL12G010330 | Response regulator 9 (AHRD V1 ***- Q94LW1_MAIZE)%3B contains Interpro domain(s) IPR017053 Response regulator%2C plant B-type | ch12 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV11G00370 | name=GSVIVG01003721001; | chr11 | + | View |
VV04G12560 | name=GSVIVG01035903001; | chr4 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM05G43170 | No description available. | 5 | - | View |
ZM05G21380 | No description available. | 5 | - | View |