Anchorpoints
- Gene id
- PT17G11200
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G11580 | No description available. | Chr08 | - | View |
PT10G13020 | No description available. | Chr10 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G67260 | Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. TCP family transcription factor TCP1; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1624 Blast hits to 1624 proteins in 376 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1618; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | 1 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00179G00280 | No description available. | supercontig_179 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS08G33530 | TCP family transcription factor, putative, expressed | 8 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_08G31570 | No description available. | Chr08 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G045030 | CYCLOIDEA-like protein (Fragment) (AHRD V1 ***- Q84RA7_9LAMI)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch03 | - | View |
SL02G089830 | CYCLOIDEA-like protein (Fragment) (AHRD V1 *-*- Q84RB2_9LAMI)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch02 | - | View |
SL04G006980 | CYCLOIDEA-like group 1B protein (Fragment) (AHRD V1 *-*- Q6VM90_LUPAG)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch04 | - | View |
SL03G119770 | CYCLOIDEA-like (Fragment) (AHRD V1 *-*- Q2TKW2_9DIPS)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch03 | + | View |
SL05G009900 | CYCLOIDEA-like group 1B protein (Fragment) (AHRD V1 *-*- Q6VM71_LUPDI)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch05 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV01G08300 | name=GSVIVG01011962001; | chr1 | - | View |
VV14G15350 | name=GSVIVG01036449001; | chr14 | + | View |