Anchorpoints

Gene id
PT17G11200
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT08G11580No description available.Chr08-View
PT10G13020No description available.Chr10+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G67260Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. TCP family transcription factor TCP1; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1); Has 1624 Blast hits to 1624 proteins in 376 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1618; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00179G00280No description available.supercontig_179+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G33530TCP family transcription factor, putative, expressed8+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_08G31570No description available.Chr08+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G045030CYCLOIDEA-like protein (Fragment) (AHRD V1 ***- Q84RA7_9LAMI)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch03-View
SL02G089830CYCLOIDEA-like protein (Fragment) (AHRD V1 *-*- Q84RB2_9LAMI)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch02-View
SL04G006980CYCLOIDEA-like group 1B protein (Fragment) (AHRD V1 *-*- Q6VM90_LUPAG)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch04-View
SL03G119770CYCLOIDEA-like (Fragment) (AHRD V1 *-*- Q2TKW2_9DIPS)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch03+View
SL05G009900CYCLOIDEA-like group 1B protein (Fragment) (AHRD V1 *-*- Q6VM71_LUPDI)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch05+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G08300name=GSVIVG01011962001;chr1-View
VV14G15350name=GSVIVG01036449001;chr14+View


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Gene id
Species
Description
Chromosome
Strand