Anchorpoints

Gene id
PT17G11130
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT04G10440No description available.Chr04-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G67210Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein (TAIR:AT5G38600.1); Has 197 Blast hits to 197 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 6; Plants - 67; Viruses - 4; Other Eukaryotes - 16 (source: NCBI BLink).1+View
AT5G38600Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein (TAIR:AT1G67210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein5+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00179G00350No description available.supercontig_179-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G045060Zinc finger CCHC domain-containing protein 8 (AHRD V1 *--- ZCHC8_CHICK)%3B contains Interpro domain(s) IPR006568 PSP%2C proline-richch03-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G08410name=GSVIVG01011977001;chr1+View
VV14G15400name=GSVIVG01036455001;chr14-View


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Gene id
Species
Description
Chromosome
Strand