Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT17G06380
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G32540 | No description available. | Chr01 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G41060 | DHHC-type zinc finger family protein DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G26935.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | + | View |
| AT3G26935 | DHHC-type zinc finger family protein DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G41060.1); Has 5153 Blast hits to 5144 proteins in 252 species: Archae - 0; Bacteria - 0; Metazoa - 2200; Fungi - 770; Plants - 850; Viruses - 0; Other Eukaryotes - 1333 (source: NCBI BLink). | 3 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD3G41420 | No description available. | Bd3 | - | View |
| BD4G34790 | No description available. | Bd4 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS09G33450 | zinc finger DHHC domain-containing protein, putative, expressed | 9 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB07G026030 | No description available. | chr_7 | + | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI006G22530 | No description available. | scaffold_6 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL03G097630 | Palmitoyltransferase-like protein (AHRD V1 *-** C6YXK4_ORYSJ)%3B contains Interpro domain(s) IPR001594 Zinc finger%2C DHHC-type | ch03 | + | View |
| SL02G094390 | Palmitoyltransferase-like protein (AHRD V1 *-** C6YXK4_ORYSJ)%3B contains Interpro domain(s) IPR001594 Zinc finger%2C DHHC-type | ch02 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV14G14070 | name=GSVIVG01033036001; | chr14 | - | View |