Anchorpoints
- Gene id
- PT16G13810
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G10930 | No description available. | Chr06 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G38560 | transcript elongation factor IIS (TFIIS); CONTAINS InterPro DOMAIN/s: Zinc finger, TFIIS-type (InterPro:IPR001222), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor S-II, central domain (InterPro:IPR003618), Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor S-IIM (InterPro:IPR017890), Transcription elongation factor, IIS (InterPro:IPR016492), Transcription elongation factor, TFIIS (InterPro:IPR006289), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G42730.1); Has 1858 Blast hits to 1830 proteins in 294 species: Archae - 58; Bacteria - 2; Metazoa - 702; Fungi - 370; Plants - 279; Viruses - 52; Other Eukaryotes - 395 (source: NCBI BLink). transcript elongation factor IIS Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy. | 2 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00086G00740 | No description available. | supercontig_86 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA05G28670 | CC_gene:Tcea2,CC_gene:Tcea1,CC_gene:TCEA1,CC_gene:TCEA2,CC_functional_completeness:complete,PRODUCT:Putative Transcription elongation factor A protein 2,GO:0030528,GO:0008270,GO:0006357,GO:0006354,GO:0005634,GO:0005515,GO:0003746,GO:0003711,GO:0003702,GO:0003677,GO:0003676,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr5 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G095720 | Transcription elongation factor A protein 2 (AHRD V1 **** B6TCL2_MAIZE)%3B contains Interpro domain(s) IPR006289 Transcription elongation factor%2C TFIIS | ch03 | - | View |
SL05G052190 | Transcription elongation factor A protein 2 (AHRD V1 ***- B6TCL2_MAIZE)%3B contains Interpro domain(s) IPR006289 Transcription elongation factor%2C TFIIS | ch05 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G05730 | name=GSVIVG01030171001; | chr8 | + | View |
VV13G09090 | name=GSVIVG01032658001; | chr13 | + | View |