Anchorpoints

Gene id
PT16G13200
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT06G10660No description available.Chr06-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G08850HEAT repeat ;WD domain, G-beta repeat protein protein Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive. RAPTOR1; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 7799 Blast hits to 6065 proteins in 379 species: Archae - 2; Bacteria - 1590; Metazoa - 2741; Fungi - 1618; Plants - 862; Viruses - 0; Other Eukaryotes - 986 (source: NCBI BLink).3-View
AT5G01770RAPTOR2 (RAPTOR2); FUNCTIONS IN: binding, nucleotide binding; INVOLVED IN: cell growth; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), WD40 repeat (InterPro:IPR001680), Regulatory associated protein of TOR (InterPro:IPR004083), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat ;WD domain, G-beta repeat protein protein (TAIR:AT3G08850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutations in this gene have no visible effects on embryo or plant development. HEAT repeat ;WD domain, G-beta repeat protein protein5-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD4G44667No description available.Bd4+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00086G00070No description available.supercontig_86+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS11G01872HEAT repeat family protein, putative, expressed Regulatory-associated protein of TOR 211-View
OS12G01922Regulatory-associated protein of TOR 1 WD domain and HEAT domain containing protein, putative, expressed Regulatory-associated protein of TOR 212-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_12G01040No description available.Chr12-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB05G000820No description available.chr_5-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI007G33620No description available.scaffold_7+View
SI008G01600No description available.scaffold_8+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G014780WD-repeat protein mip1 (AHRD V1 *--- C5FLG0_NANOT)%3B contains Interpro domain(s) IPR004083 Regulatory associated protein of TORch09+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G06200name=GSVIVG01030232001;chr8-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G28320No description available.4-View


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Chromosome
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