Anchorpoints
- Gene id
- PT16G13190
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G10650 | No description available. | Chr06 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G01760 | ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, intracellular; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT2G38410.1); Has 1737 Blast hits to 1724 proteins in 203 species: Archae - 0; Bacteria - 8; Metazoa - 865; Fungi - 471; Plants - 276; Viruses - 2; Other Eukaryotes - 115 (source: NCBI BLink). ENTH/VHS/GAT family protein | 5 | + | View |
AT2G38410 | ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT5G01760.1); Has 42231 Blast hits to 23362 proteins in 1216 species: Archae - 12; Bacteria - 2643; Metazoa - 15006; Fungi - 7319; Plants - 4169; Viruses - 367; Other Eukaryotes - 12715 (source: NCBI BLink). ENTH/VHS/GAT family protein | 2 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD2G53720 | No description available. | Bd2 | - | View |
BD2G22420 | No description available. | Bd2 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00086G00110 | No description available. | supercontig_86 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G61030 | VHS and GAT domain containing protein, expressed | 1 | - | View |
OS05G27320 | VHS and GAT domain containing protein, expressed | 5 | - | View |
OS05G39760 | VHS and GAT domain containing protein, expressed | 5 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_05G23760 | No description available. | Chr05 | - | View |
OSINDICA_01G57680 | No description available. | Chr01 | - | View |
OSINDICA_05G35590 | No description available. | Chr05 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB09G015260 | No description available. | chr_9 | - | View |
SB03G038450 | No description available. | chr_3 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI005G37310 | No description available. | scaffold_5 | - | View |
SI003G20930 | No description available. | scaffold_3 | - | View |
SI003G28870 | No description available. | scaffold_3 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G014790 | Class E vacuolar protein-sorting machinery protein hse1 (AHRD V1 *--- HSE1_EMENI)%3B contains Interpro domain(s) IPR018205 VHS subgroup | ch09 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G06210 | name=GSVIVG01030233001; | chr8 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM06G26470 | protein transporter | 6 | + | View |
ZM06G23070 | No description available. | 6 | + | View |
ZM03G28150 | No description available. | 3 | + | View |