Anchorpoints

Gene id
PT16G11360
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT08G06640No description available.Chr08+View
PT10G19100No description available.Chr10-View
PT06G09830No description available.Chr06-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G38120Transmembrane amino acid transporter family protein Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning. Shoot supplied ammonium targets AUX1 and inhibits lateral root emergence. AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).2+View
AT5G01240Encodes LAX1 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization. like AUXIN RESISTANT 1 (LAX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G38120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). like AUXIN RESISTANT 15+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G55340No description available.Bd2+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA06G34560CC_gene:LAX5,CC_gene:Os05g0447200,CC_gene:LAX1,CC_gene:AUX1,CC_gene:LAX4,CC_gene:LAX2,CC_gene:Os01g0856500,CC_functional_completeness:complete,PRODUCT:Auxin transporter-like protein 1,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G37470transmembrane amino acid transporter protein, putative, expressed5-View
OS01G63770Auxin transporter-like protein 1 transmembrane amino acid transporter protein, putative, expressed1+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_05G33210No description available.Chr05-View
OSINDICA_01G60360No description available.Chr01+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB09G021990No description available.chr_9-View
SB03G040320No description available.chr_3+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI003G22770No description available.scaffold_3+View
SI005G39660No description available.scaffold_5+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G076790Auxin transporter-like protein 1 (AHRD V1 **** B6U1Y3_MAIZE)%3B contains Interpro domain(s) IPR013057 Amino acid transporter%2C transmembranech10-View
SL09G014380Auxin transporter-like protein 1 (AHRD V1 **** B6U1Y3_MAIZE)%3B contains Interpro domain(s) IPR013057 Amino acid transporter%2C transmembranech09+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G26480auxin transporter-like protein 13-View


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Gene id
Species
Description
Chromosome
Strand