Anchorpoints
- Gene id
- PT16G11360
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G06640 | No description available. | Chr08 | + | View |
PT10G19100 | No description available. | Chr10 | - | View |
PT06G09830 | No description available. | Chr06 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G38120 | Transmembrane amino acid transporter family protein Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning. Shoot supplied ammonium targets AUX1 and inhibits lateral root emergence. AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). | 2 | + | View |
AT5G01240 | Encodes LAX1 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization. like AUXIN RESISTANT 1 (LAX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G38120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). like AUXIN RESISTANT 1 | 5 | + | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD2G55340 | No description available. | Bd2 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA06G34560 | CC_gene:LAX5,CC_gene:Os05g0447200,CC_gene:LAX1,CC_gene:AUX1,CC_gene:LAX4,CC_gene:LAX2,CC_gene:Os01g0856500,CC_functional_completeness:complete,PRODUCT:Auxin transporter-like protein 1,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr6 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS05G37470 | transmembrane amino acid transporter protein, putative, expressed | 5 | - | View |
OS01G63770 | Auxin transporter-like protein 1 transmembrane amino acid transporter protein, putative, expressed | 1 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_05G33210 | No description available. | Chr05 | - | View |
OSINDICA_01G60360 | No description available. | Chr01 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB09G021990 | No description available. | chr_9 | - | View |
SB03G040320 | No description available. | chr_3 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI003G22770 | No description available. | scaffold_3 | + | View |
SI005G39660 | No description available. | scaffold_5 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL10G076790 | Auxin transporter-like protein 1 (AHRD V1 **** B6U1Y3_MAIZE)%3B contains Interpro domain(s) IPR013057 Amino acid transporter%2C transmembrane | ch10 | - | View |
SL09G014380 | Auxin transporter-like protein 1 (AHRD V1 **** B6U1Y3_MAIZE)%3B contains Interpro domain(s) IPR013057 Amino acid transporter%2C transmembrane | ch09 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G26480 | auxin transporter-like protein 1 | 3 | - | View |