Anchorpoints

Gene id
PT16G06060
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT06G19470No description available.Chr06+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G06650GLABROUS INFLORESCENCE STEMS 2 (GIS2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, response to gibberellin stimulus, response to cytokinin stimulus, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G58070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). C2H2 and C2HC zinc fingers superfamily protein5+View
AT2G41940zinc finger protein 8 Encodes a zinc finger protein containing only a single zinc finger. zinc finger protein 8 (ZFP8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G58070.1); Has 1033 Blast hits to 1031 proteins in 54 species: Archae - 0; Bacteria - 9; Metazoa - 26; Fungi - 10; Plants - 958; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).2+View
AT3G58070C2H2 and C2HC zinc fingers superfamily protein Putative transcription factor, contains C2H2 domain, regulates aspects of shoot maturation in Arabidopsis thaliana. GIS loss-of-function mutations affect the epidermal differentiation of inflorescence organs, causing a premature decrease in trichome production on successive leaves, stem internodes, and branches. Overexpression has the opposite effect on trichome initiation and causes other heterochronic phenotypes, affecting flowering and juvenile?adult leaf transition and inducing the formation of rosette leaves on inflorescence stems. GLABROUS INFLORESCENCE STEMS (GIS); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: trichome differentiation, trichome branching, response to gibberellin stimulus, regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 8 (TAIR:AT2G41940.1); Has 936 Blast hits to 936 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 934; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G57370No description available.Bd3+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA08G23340CC_gene:ZFP5,CC_gene:ZFP2,CC_gene:ZFP3,CC_gene:ZFP1,CC_gene:ZFP4,CC_gene:KNU,CC_gene:ZFP7,CC_gene:ZFP6,CC_functional_completeness:complete,PRODUCT:Putative ZOS2-17 - C2H2 zinc finger protein%2C expressed,GO:0008270,GO:0005622,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G53530ZOS2-17 - C2H2 zinc finger protein, expressed2-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G034740No description available.chr_4-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G35250No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G078970Zinc finger protein (AHRD V1 *-*- B6SZ06_MAIZE)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-typech10-View
SL03G058160EPF-type Cis2-His2 zinc finger transcription factor (AHRD V1 *-** D8RBD0_SELML)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-typech03+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G42220No description available.5-View


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