Anchorpoints

Gene id
PT15G10600
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT03G16270No description available.Chr03-View
PT12G10710No description available.Chr12+View
PT01G06730No description available.Chr01+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G61960A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices. MEI2-like protein 1 (ML1); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: MEI2-like 4 (TAIR:AT5G07290.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). MEI2-like protein 15-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD5G08580No description available.Bd5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00013G01550No description available.supercontig_13+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA10G12380CC_gene:pab1,CC_gene:ncl,CC_gene:Ncl,CC_gene:TE1,CC_gene:PLA2,CC_gene:mei2,CC_functional_completeness:complete,PRODUCT:AML1%2C putative%2C expressed,GO:0003676,GO:0000166,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10+View
MA10G18770CC_gene:ncl,CC_gene:NCL,CC_gene:Ncl,CC_gene:TE1,CC_gene:PLA2,CC_gene:mei2,CC_functional_completeness:complete,PRODUCT:AML1%2C putative%2C expressed,GO:0003676,GO:0000166,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G31290AML1, putative, expressed Protein MEI2-like 42+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G30090No description available.Chr02+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB06G014670No description available.chr_6+View
SB04G021130No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI007G08340No description available.scaffold_7+View
SI001G18480No description available.scaffold_1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G09020name=GSVIVG01008646001;chr17-View
VV01G01170name=GSVIVG01001086001;chr1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G29150No description available.5+View


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Gene id
Species
Description
Chromosome
Strand