PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: PT15G03900
Organism: Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
PT12G04730	No description available.	Chr12	+	View

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G48600	phosphoethanolamine N-methyltransferase (PMEAMT); FUNCTIONS IN: phosphomethylethanolamine N-methyltransferase activity, phosphoethanolamine N-methyltransferase activity; INVOLVED IN: phosphatidylcholine biosynthetic process; EXPRESSED IN: sperm cell, cotyledon, male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G18000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a phosphoethanolamine N-methyltransferase that catalyses the last two methylation steps of the three sequential methylations of phosphoethanolamine (PEA) that are required for the synthesis of phosphocholine (PCho) in plants.	1	+	View
AT1G73600	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity, phosphoethanolamine N-methyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G18000.1); Has 22304 Blast hits to 21648 proteins in 2625 species: Archae - 587; Bacteria - 16224; Metazoa - 297; Fungi - 950; Plants - 536; Viruses - 5; Other Eukaryotes - 3705 (source: NCBI BLink).	1	+	View
AT3G18000	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Arabidopsis thaliana N-methyltransferase-like protein mRNA. Reduce transmission through pollen. XIPOTL 1 (XPL1); CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G48600.2); Has 22524 Blast hits to 22132 proteins in 2666 species: Archae - 571; Bacteria - 16701; Metazoa - 242; Fungi - 923; Plants - 574; Viruses - 10; Other Eukaryotes - 3503 (source: NCBI BLink).	3	+	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00003G03960	No description available.	supercontig_3	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL03G118750	Phosphoethanolamine N-methyltransferase (AHRD V1 **** Q9AXH3_SOLLC)%3B contains Interpro domain(s) IPR000896 Hemocyanin%2C copper-containing	ch03	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV17G07140	name=GSVIVG01008429001;	chr17	+	View
VV01G06350	name=GSVIVG01011715001;	chr1	-	View