Anchorpoints
- Gene id
- PT14G17040
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G55970 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26580.2); Has 9514 Blast hits to 9491 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 2536; Fungi - 688; Plants - 4940; Viruses - 19; Other Eukaryotes - 1331 (source: NCBI BLink). RING/U-box superfamily protein | 5 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00012G01150 | No description available. | supercontig_12 | - | View |
CP00136G00520 | No description available. | supercontig_136 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI002G25080 | No description available. | scaffold_2 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G006230 | RING-H2 finger protein (AHRD V1 ***- Q30D22_PONTR)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch12 | - | View |
SL07G045190 | RING-H2 finger protein (AHRD V1 ***- Q30D22_PONTR)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch07 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV12G09980 | name=GSVIVG01030125001; | chr12 | - | View |