Anchorpoints

Gene id
PT14G12110
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT08G10680No description available.Chr08+View
PT10G14270No description available.Chr10-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G47410WD40/YVTN repeat-like-containing domain;Bromodomain; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Bromodomain (InterPro:IPR001487), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD40/YVTN repeat-like-containing domain;Bromodomain (TAIR:AT5G49430.1); Has 67123 Blast hits to 29366 proteins in 847 species: Archae - 50; Bacteria - 8348; Metazoa - 26818; Fungi - 14890; Plants - 8157; Viruses - 8; Other Eukaryotes - 8852 (source: NCBI BLink). WD40/YVTN repeat-like-containing domain;Bromodomain2+View
AT5G49430WD40/YVTN repeat-like-containing domain;Bromodomain WD40/YVTN repeat-like-containing domain;Bromodomain; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Bromodomain (InterPro:IPR001487), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD40/YVTN repeat-like-containing domain;Bromodomain (TAIR:AT2G47410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00018G00330No description available.supercontig_18-View
CP00009G00800No description available.supercontig_9+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA11G21300CC_gene:HET-E1,CC_gene:DDB_G0285837,CC_gene:Brwd3,CC_gene:BRWD3,CC_gene:Brwd1,CC_gene:Phip,CC_gene:PHIP,CC_gene:BRWD1,CC_functional_completeness:complete,PRODUCT:Putative WD domain%2C G-beta repeat domain containing protein%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:2.7.11.7chr11-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G19340WD domain, G-beta repeat domain containing protein, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G18140No description available.Chr03-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G44350No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G079510WD-40 repeat protein-like (AHRD V1 *--- Q9FGX4_ARATH)%3B contains Interpro domain(s) IPR017986 WD40 repeat%2C regionch01+View
SL01G060050WD-40 repeat protein-like (AHRD V1 **-- Q9FGX4_ARATH)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G09230name=GSVIVG01028117001;chr7-View
VV05G11750name=GSVIVG01035014001;chr5+View


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Gene id
Species
Description
Chromosome
Strand