Anchorpoints
- Gene id
- PT13G01950
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G02740 | No description available. | Chr05 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G09030 | 'nuclear factor Y, subunit B4' (NF-YB4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit B5 (TAIR:AT2G47810.1); Has 1487 Blast hits to 1487 proteins in 249 species: Archae - 0; Bacteria - 0; Metazoa - 489; Fungi - 373; Plants - 505; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). nuclear factor Y, subunit B4 | 1 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD2G60030 | No description available. | Bd2 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00048G00700 | No description available. | supercontig_48 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA08G10370 | CC_gene:NFYB7,CC_gene:NFYB10,CC_gene:NFY2,CC_gene:NFYB1,CC_gene:NFYB2,CC_gene:NFYB3,CC_gene:NFYB5,CC_functional_completeness:complete,PRODUCT:histone-like transcription factor and archaeal histone%2C putative%2C expressed,GO:0043565,GO:0005634,GO:0005622,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | - | View |
MA11G05800 | CC_gene:NFYB1,CC_gene:NFYB7,CC_gene:NFY2,CC_gene:NFYB10,CC_gene:NFYB2,CC_gene:NFYB3,CC_gene:NFYB5,CC_functional_completeness:complete,PRODUCT:histone-like transcription factor and archaeal histone%2C putative%2C expressed,GO:0043565,GO:0005634,GO:0005622,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr11 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB03G045130 | No description available. | chr_3 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI005G45550 | No description available. | scaffold_5 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G099320 | Nuclear transcription factor Y subunit B-3 (AHRD V1 **** B6SUG8_MAIZE)%3B contains Interpro domain(s) IPR003957 Transcription factor%2C CBFA/NFYB%2C DNA topoisomerase | ch01 | - | View |
SL09G074760 | Nuclear transcription factor Y subunit B-3 (AHRD V1 **** B6SUG8_MAIZE)%3B contains Interpro domain(s) IPR003957 Transcription factor%2C CBFA/NFYB%2C DNA topoisomerase | ch09 | - | View |
SL01G067130 | Nuclear transcription factor Y subunit B-3 (AHRD V1 **** B6SUG8_MAIZE)%3B contains Interpro domain(s) IPR003957 Transcription factor%2C CBFA/NFYB%2C DNA topoisomerase | ch01 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G08440 | name=GSVIVG01031089001; | chr14 | + | View |
VV07G03580 | name=GSVIVG01010959001; | chr7 | + | View |