Anchorpoints
- Gene id
- PT12G09180
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G50280 | embryo defective 1006 (EMB1006); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Pentatricopeptide repeat (PPR) superfamily protein | 5 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA03G17500 | CC_gene:EMB2745,CC_gene:At1g63070,CC_gene:At5g65560,CC_gene:At1g63080,CC_gene:PGR3,CC_gene:Rf1,CC_gene:At1g09900,CC_gene:At3g46610,CC_functional_completeness:complete,PRODUCT:Pentatricopeptide repeat-containing protein At3g46610,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G093620 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7M6I3_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | ch02 | + | View |
SL03G111650 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7M7W8_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | ch03 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV12G02720 | name=GSVIVG01020691001; | chr12 | + | View |
VV14G01500 | name=GSVIVG01003980001; | chr14 | - | View |
VV17G00400 | name=GSVIVG01007576001; | chr17 | + | View |