Anchorpoints

Gene id
PT12G09180
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G50280embryo defective 1006 (EMB1006); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Pentatricopeptide repeat (PPR) superfamily protein5+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA03G17500CC_gene:EMB2745,CC_gene:At1g63070,CC_gene:At5g65560,CC_gene:At1g63080,CC_gene:PGR3,CC_gene:Rf1,CC_gene:At1g09900,CC_gene:At3g46610,CC_functional_completeness:complete,PRODUCT:Pentatricopeptide repeat-containing protein At3g46610,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr3-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G093620Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7M6I3_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeatch02+View
SL03G111650Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7M7W8_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeatch03+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G02720name=GSVIVG01020691001;chr12+View
VV14G01500name=GSVIVG01003980001;chr14-View
VV17G00400name=GSVIVG01007576001;chr17+View


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Gene id
Species
Description
Chromosome
Strand