Anchorpoints

Gene id
PT12G03900
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT08G14110No description available.Chr08-View
PT10G10050No description available.Chr10+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G02000glutamate decarboxylase 3 (GAD3); FUNCTIONS IN: calmodulin binding; INVOLVED IN: carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 2817 Blast hits to 2814 proteins in 863 species: Archae - 192; Bacteria - 1666; Metazoa - 146; Fungi - 354; Plants - 282; Viruses - 7; Other Eukaryotes - 170 (source: NCBI BLink). glutamate decarboxylase 32-View
AT5G17330glutamate decarboxylase (GAD); FUNCTIONS IN: calmodulin binding, glutamate decarboxylase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent decarboxylase (InterPro:IPR002129), Glutamate decarboxylase (InterPro:IPR010107), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: glutamate decarboxylase 4 (TAIR:AT2G02010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes one of two isoforms of glutamate decarboxylase. glutamate decarboxylase5+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G10480No description available.Bd1-View
BD1G68807No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00002G00710No description available.supercontig_2-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G13300glutamate decarboxylase, putative, expressed3+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G11740No description available.Chr03+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G041700No description available.chr_1-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G49210No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G098240Glutamate decarboxylase (AHRD V1 **** B6TV07_MAIZE)%3B contains Interpro domain(s) IPR010107 Glutamate decarboxylase Glutamate decarboxylasech03+View
SL01G005000Glutamate decarboxylase (AHRD V1 ***- Q1I1D8_CITSI)%3B contains Interpro domain(s) IPR010107 Glutamate decarboxylasech01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G05120name=GSVIVG01011565001;chr1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G25160No description available.9-View


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Gene id
Species
Description
Chromosome
Strand