Anchorpoints
- Gene id
- PT11G07030
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT04G06050 | No description available. | Chr04 | + | View |
PT13G12360 | No description available. | Chr13 | - | View |
PT19G09250 | No description available. | Chr19 | + | View |
PT02G01950 | No description available. | Chr02 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G45750 | RAB GTPase homolog A1C RAB GTPase homolog A1C (RABA1c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1D (TAIR:AT4G18800.1); Has 28355 Blast hits to 28298 proteins in 771 species: Archae - 32; Bacteria - 162; Metazoa - 14720; Fungi - 4238; Plants - 3283; Viruses - 20; Other Eukaryotes - 5900 (source: NCBI BLink). | 5 | + | View |
AT4G18800 | RAB GTPase homolog A1D RAB GTPase homolog A1D (RABA1d); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1C (TAIR:AT5G45750.1); Has 27980 Blast hits to 27923 proteins in 754 species: Archae - 26; Bacteria - 162; Metazoa - 14618; Fungi - 4214; Plants - 3069; Viruses - 20; Other Eukaryotes - 5871 (source: NCBI BLink). Encodes RabA1d, a member of the RabA subfamily of small Rab GTPases. | 4 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD1G38190 | No description available. | Bd1 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00052G01440 | No description available. | supercontig_52 | - | View |
CP00077G00250 | No description available. | supercontig_77 | - | View |
CP00007G00910 | No description available. | supercontig_7 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS06G35814 | ras-related protein, putative, expressed Ras-related protein RIC2 | 6 | - | View |
OS01G54590 | ras-related protein, putative, expressed | 1 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_01G51530 | No description available. | Chr01 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI004G18250 | No description available. | scaffold_4 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G055290 | Ras-related protein Rab-25 (AHRD V1 ***- RAB25_BOVIN)%3B contains Interpro domain(s) IPR015595 Rab11-related | ch07 | - | View |
SL02G072180 | Ras-related protein Rab-25 (AHRD V1 ***- RAB25_BOVIN)%3B contains Interpro domain(s) IPR015595 Rab11-related | ch02 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV00G19150 | name=GSVIVG01006975001; | chrUn | + | View |
VV19G01690 | name=GSVIVG01014181001; | chr19 | + | View |
VV10G02470 | name=GSVIVG01021253001; | chr10 | - | View |
VV10G01640 | name=GSVIVG01021143001; | chr10 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM06G25840 | No description available. | 6 | - | View |
ZM02G35820 | ras-related protein Rab-6A | 2 | + | View |