Anchorpoints

Gene id
PT11G07030
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT04G06050No description available.Chr04+View
PT13G12360No description available.Chr13-View
PT19G09250No description available.Chr19+View
PT02G01950No description available.Chr02-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G45750RAB GTPase homolog A1C RAB GTPase homolog A1C (RABA1c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1D (TAIR:AT4G18800.1); Has 28355 Blast hits to 28298 proteins in 771 species: Archae - 32; Bacteria - 162; Metazoa - 14720; Fungi - 4238; Plants - 3283; Viruses - 20; Other Eukaryotes - 5900 (source: NCBI BLink).5+View
AT4G18800RAB GTPase homolog A1D RAB GTPase homolog A1D (RABA1d); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1C (TAIR:AT5G45750.1); Has 27980 Blast hits to 27923 proteins in 754 species: Archae - 26; Bacteria - 162; Metazoa - 14618; Fungi - 4214; Plants - 3069; Viruses - 20; Other Eukaryotes - 5871 (source: NCBI BLink). Encodes RabA1d, a member of the RabA subfamily of small Rab GTPases.4-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G38190No description available.Bd1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00052G01440No description available.supercontig_52-View
CP00077G00250No description available.supercontig_77-View
CP00007G00910No description available.supercontig_7-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS06G35814ras-related protein, putative, expressed Ras-related protein RIC26-View
OS01G54590ras-related protein, putative, expressed1+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G51530No description available.Chr01+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI004G18250No description available.scaffold_4-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G055290Ras-related protein Rab-25 (AHRD V1 ***- RAB25_BOVIN)%3B contains Interpro domain(s) IPR015595 Rab11-relatedch07-View
SL02G072180Ras-related protein Rab-25 (AHRD V1 ***- RAB25_BOVIN)%3B contains Interpro domain(s) IPR015595 Rab11-relatedch02+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV00G19150name=GSVIVG01006975001;chrUn+View
VV19G01690name=GSVIVG01014181001;chr19+View
VV10G02470name=GSVIVG01021253001;chr10-View
VV10G01640name=GSVIVG01021143001;chr10-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM06G25840No description available.6-View
ZM02G35820ras-related protein Rab-6A2+View


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Gene id
Species
Description
Chromosome
Strand