Anchorpoints

Gene id
PT11G04550
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G61210DWA3 encodes a DWD(DDB1 binding WD40) protein. Invitro analyses suggest its involvement in the negative regulation of ABA responses. Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G11160.1); Has 121273 Blast hits to 45862 proteins in 1282 species: Archae - 102; Bacteria - 12578; Metazoa - 49683; Fungi - 26785; Plants - 15760; Viruses - 206; Other Eukaryotes - 16159 (source: NCBI BLink). Transducin/WD40 repeat-like superfamily protein1+View
AT1G11160Transducin/WD40 repeat-like superfamily protein Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G51760No description available.Bd2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00027G00940No description available.supercontig_27+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G09140CC_gene:Katnb1,CC_gene:katnb1,CC_gene:KATNB1,CC_gene:At5g23430,CC_functional_completeness:complete,PRODUCT:katanin p80 WD40 repeat-containing subunit B1 homolog 1%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:2.7.11.7chr1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS10G35200katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed10-View
OS01G57210katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed1+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G036400No description available.chr_3+View
SB01G018340No description available.chr_1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G078800WD-repeat protein (AHRD V1 *--- B0C2Q9_ACAM1)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch02+View


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Description
Chromosome
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