Anchorpoints

Gene id
PT10G25350
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT08G00500No description available.Chr08+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G78900vacuolar ATP synthase subunit A (VHA-A); FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: response to salt stress, proton transport, Golgi organization, pollen development; LOCATED IN: in 8 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, V1 complex, subunit A (InterPro:IPR005725), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 40508 Blast hits to 38748 proteins in 9967 species: Archae - 874; Bacteria - 22679; Metazoa - 1366; Fungi - 853; Plants - 8095; Viruses - 0; Other Eukaryotes - 6641 (source: NCBI BLink). vacuolar ATP synthase subunit A Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology.1+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G05590No description available.Bd3+View
BD1G31690No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00155G00130No description available.supercontig_155-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G10870CC_gene:VHA-A,CC_gene:CVA69.24,CC_functional_completeness:complete,PRODUCT:V-type proton ATPase catalytic subunit A,GO:0046034,GO:0016469,GO:0015992,GO:0015986,GO:0005524,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.15chr1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS06G45120ATP synthase, putative, expressed6-View
OS02G07870ATP synthase, putative, expressed2+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G07630No description available.Chr02+View
OSINDICA_06G41070No description available.Chr06-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G005040No description available.chr_4+View
SB10G026440No description available.chr_10-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G07130No description available.scaffold_1-View
SI004G19120No description available.scaffold_4+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G063330V-type ATP synthase alpha chain (AHRD V1 ***- VATA_METKA)%3B contains Interpro domain(s) IPR005725 ATPase%2C V1 complex%2C subunit Ach06-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G20690No description available.5+View
ZM04G38940V-type proton ATPase catalytic subunit A Fragment (V-ATPase subunit A)(EC 3.6.3.14)(Vacuolar proton pump subunit alpha)(V-ATPase 69 kDa subunit) V-type proton ATPase catalytic subunit A4-View


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Description
Chromosome
Strand