Anchorpoints
- Gene id
- PT10G23060
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G02990 | No description available. | Chr08 | + | View |
PT09G02800 | No description available. | Chr09 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G22880 | histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). histone B2 Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases. | 5 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL11G066430 | Histone H2B (AHRD V1 ***- B9T301_RICCO)%3B contains Interpro domain(s) IPR000558 Histone H2B Histone H2B.2 | ch11 | + | View |
SL11G007920 | Histone H2B (AHRD V1 ***- A5BCC0_VITVI)%3B contains Interpro domain(s) IPR000558 Histone H2B Histone H2B.3 | ch11 | - | View |
SL05G055440 | Histone H2B (AHRD V1 ***- Q2XPW1_SOLTU)%3B contains Interpro domain(s) IPR000558 Histone H2B | ch05 | - | View |
SL03G071620 | Histone H2B (AHRD V1 ***- A2IBL2_NICBE)%3B contains Interpro domain(s) IPR000558 Histone H2B | ch03 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV13G02350 | name=GSVIVG01016164001; | chr13 | + | View |
VV06G08680 | name=GSVIVG01031447001; | chr6 | - | View |