Anchorpoints

Gene id
PT10G23060
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT08G02990No description available.Chr08+View
PT09G02800No description available.Chr09+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G22880histone B2 (HTB2); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). histone B2 Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.5-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G066430Histone H2B (AHRD V1 ***- B9T301_RICCO)%3B contains Interpro domain(s) IPR000558 Histone H2B Histone H2B.2ch11+View
SL11G007920Histone H2B (AHRD V1 ***- A5BCC0_VITVI)%3B contains Interpro domain(s) IPR000558 Histone H2B Histone H2B.3ch11-View
SL05G055440Histone H2B (AHRD V1 ***- Q2XPW1_SOLTU)%3B contains Interpro domain(s) IPR000558 Histone H2Bch05-View
SL03G071620Histone H2B (AHRD V1 ***- A2IBL2_NICBE)%3B contains Interpro domain(s) IPR000558 Histone H2Bch03+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G02350name=GSVIVG01016164001;chr13+View
VV06G08680name=GSVIVG01031447001;chr6-View


Download

Gene id
Species
Description
Chromosome
Strand