Anchorpoints

Gene id
PT10G22470
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT08G03780No description available.Chr08-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G04240EARLY FLOWERING 6 (ELF6); CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), Zinc finger, C2H2-like (InterPro:IPR015880), Transcription factor jumonji (InterPro:IPR013129), Zinc finger, C2H2-type (InterPro:IPR007087), Transcription factor jumonji, JmjN (InterPro:IPR003349), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: relative of early flowering 6 (TAIR:AT3G48430.1); Has 112631 Blast hits to 36360 proteins in 1127 species: Archae - 0; Bacteria - 99; Metazoa - 105700; Fungi - 2573; Plants - 699; Viruses - 11; Other Eukaryotes - 3549 (source: NCBI BLink). Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein5+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G74997No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00053G00920No description available.supercontig_53+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G55400No description available.scaffold_9-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G02920name=GSVIVG01016246001;chr13+View


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Gene id
Species
Description
Chromosome
Strand