Anchorpoints
- Gene id
- PT10G20600
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G05450 | No description available. | Chr08 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G39550 | PGGT-I; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: RAB geranylgeranyl transferase beta subunit 1 (TAIR:AT5G12210.1); Has 1518 Blast hits to 1317 proteins in 251 species: Archae - 0; Bacteria - 20; Metazoa - 603; Fungi - 437; Plants - 177; Viruses - 0; Other Eukaryotes - 281 (source: NCBI BLink). encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways. Prenyltransferase family protein | 2 | + | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD2G03310 | No description available. | Bd2 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00001G03840 | No description available. | supercontig_1 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA10G02520 | CC_gene:FNTB,CC_gene:Fntb,CC_gene:pggt1b,CC_gene:Pggt1b,CC_gene:PGGT1B,CC_functional_completeness:complete,PRODUCT:Putative Geranylgeranyl transferase type-1 subunit beta,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:2.5.1.58 | chr10 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G05680 | geranylgeranyl transferase type-1 subunit beta, putative, expressed | 1 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_01G05140 | No description available. | Chr01 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB03G006060 | No description available. | chr_3 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI005G10380 | No description available. | scaffold_5 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G054520 | Geranylgeranyl transferase type i beta subunit (AHRD V1 ***- Q17K57_AEDAE)%3B contains Interpro domain(s) IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid | ch05 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV13G05230 | name=GSVIVG01016534001; | chr13 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G05030 | No description available. | 3 | - | View |