Anchorpoints

Gene id
PT10G20140
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT06G08760No description available.Chr06-View
PT08G05800No description available.Chr08-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G39710Eukaryotic aspartyl protease family protein Encodes a Cysteine-rich peptide (CRP) family protein Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).2-View
AT5G02190encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage. PROMOTION OF CELL SURVIVAL 1 (PCS1); CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G39710.1); Has 2066 Blast hits to 2053 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 96; Plants - 1822; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). Eukaryotic aspartyl protease family protein5+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G54780No description available.Bd2-View
BD1G66770No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00001G04200No description available.supercontig_1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA02G16790CC_gene:PAG2,CC_gene:BG,CC_gene:ASP1,CC_gene:At5g10080,CC_gene:At1g65240,CC_gene:nep2,CC_gene:nep1,CC_functional_completeness:fragment,PRODUCT:Putative Aspartic proteinase nepenthesin-1,GO:0006508,GO:0004190,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr2-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G16500aspartic proteinase nepenthesin precursor, putative, expressed3+View
OS01G62630aspartic proteinase nepenthesin precursor, putative, expressed1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G14880No description available.Chr03+View
OSINDICA_01G59370No description available.Chr01-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB10G030330No description available.chr_10+View
SB01G039750No description available.chr_1-View
SB03G039590No description available.chr_3-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G38720No description available.scaffold_5-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G14280name=GSVIVG01034136001;chr8-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM08G32080No description available.8-View
ZM01G11120PCS11+View


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Gene id
Species
Description
Chromosome
Strand