Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT10G18870
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT08G06850 | No description available. | Chr08 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G05660 | Encodes a homolog of the mammalian zinc finger transcription factor NF-X1. ATNFXL2; FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786); BEST Arabidopsis thaliana protein match is: NF-X-like 1 (TAIR:AT1G10170.1); Has 10412 Blast hits to 5299 proteins in 265 species: Archae - 4; Bacteria - 94; Metazoa - 8397; Fungi - 425; Plants - 250; Viruses - 11; Other Eukaryotes - 1231 (source: NCBI BLink). sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors | 5 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00019G01710 | No description available. | supercontig_19 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS01G06550 | NF-X1-type zinc finger protein, putative, expressed | 1 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_01G06120 | No description available. | Chr01 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB03G005310 | No description available. | chr_3 | + | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI005G11240 | No description available. | scaffold_5 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G051570 | NF-X1 type zinc finger family protein (AHRD V1 **-- D7KKM7_ARALY)%3B contains Interpro domain(s) IPR000967 Zinc finger%2C NF-X1-type | ch06 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV13G10430 | name=GSVIVG01032817001; | chr13 | + | View |