Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT10G13140
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT08G11490 | No description available. | Chr08 | + | View |
| PT17G11150 | No description available. | Chr17 | + | View |
| PT04G10400 | No description available. | Chr04 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G26110 | Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development. decapping 5 decapping 5 (DCP5); CONTAINS InterPro DOMAIN/s: DFDF motif (InterPro:IPR019050), FFD/TFG box motif (InterPro:IPR019053); BEST Arabidopsis thaliana protein match is: decapping 5-like (TAIR:AT5G45330.1); Has 46741 Blast hits to 20189 proteins in 1086 species: Archae - 36; Bacteria - 10029; Metazoa - 17132; Fungi - 5632; Plants - 6968; Viruses - 649; Other Eukaryotes - 6295 (source: NCBI BLink). | 1 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00001G02260 | No description available. | supercontig_1 | - | View |
| CP00013G00570 | No description available. | supercontig_13 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS06G30060 | No description available. | 6 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB10G013950 | No description available. | chr_10 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI004G14450 | No description available. | scaffold_4 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G069280 | Protein LSM14 homolog A (AHRD V1 *--- LS14A_PONAB)%3B contains Interpro domain(s) IPR019053 FFD and TFG box motifs | ch06 | - | View |
| SL05G009980 | Protein LSM14 homolog B (AHRD V1 *--- LS14B_MOUSE)%3B contains Interpro domain(s) IPR019053 FFD and TFG box motifs | ch05 | - | View |
| SL03G119850 | Protein LSM14 homolog A-B (AHRD V1 *--- L14AB_XENLA)%3B contains Interpro domain(s) IPR019053 FFD and TFG box motifs | ch03 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV01G08370 | name=GSVIVG01011971001; | chr1 | + | View |