Anchorpoints

Gene id
PT10G12820
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G25510Eukaryotic aspartyl protease family protein Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G18490.1); Has 4139 Blast hits to 4120 proteins in 342 species: Archae - 0; Bacteria - 0; Metazoa - 1183; Fungi - 740; Plants - 2035; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink).1-View
AT3G18490Eukaryotic aspartyl protease family protein Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G25510.1); Has 4095 Blast hits to 4076 proteins in 356 species: Archae - 0; Bacteria - 4; Metazoa - 1079; Fungi - 788; Plants - 1999; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). Encodes ASPG1 (ASPARTIC PROTEASE IN GUARD CELL 1). Functions in drought avoidance through abscisic acid (ABA) signalling in guard cells.3-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00013G00080No description available.supercontig_13-View
CP00001G02030No description available.supercontig_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G009680Aspartic proteinase nepenthesin I (AHRD V1 **-- A9ZMF9_NEPAL)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch05-View
SL03G119690Aspartic proteinase nepenthesin-1 (AHRD V1 **-- C0JAA3_9ORYZ)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch03-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G08070name=GSVIVG01011932001;chr1+View
VV17G05830name=GSVIVG01008267001;chr17-View


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Gene id
Species
Description
Chromosome
Strand