Anchorpoints

Gene id
PT10G08200
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT02G04820No description available.Chr02-View
PT08G15760No description available.Chr08+View
PT05G21480No description available.Chr05+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G22830heat shock transcription factor A6B (HSFA6B); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 2517 Blast hits to 2494 proteins in 242 species: Archae - 0; Bacteria - 17; Metazoa - 509; Fungi - 485; Plants - 797; Viruses - 4; Other Eukaryotes - 705 (source: NCBI BLink). heat shock transcription factor A6B member of Heat Stress Transcription Factor (Hsf) family3+View
AT5G43840heat shock transcription factor A6A member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6A (HSFA6A); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A6B (TAIR:AT3G22830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View
AT3G63350member of Heat Stress Transcription Factor (Hsf) family winged-helix DNA-binding transcription factor family protein AT-HSFA7B; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to high light intensity, response to heat, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root, pedicel, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A7A (TAIR:AT3G51910.1); Has 2113 Blast hits to 2100 proteins in 228 species: Archae - 0; Bacteria - 6; Metazoa - 325; Fungi - 481; Plants - 785; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink).3+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G55630No description available.Bd1-View
BD1G05550No description available.Bd1-View
BD3G26920No description available.Bd3-View
BD1G08890No description available.Bd1+View
BD1G74350No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00052G01100No description available.supercontig_52+View
CP00044G01200No description available.supercontig_44+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA05G03120CC_gene:HSFA1,CC_gene:HSF30,CC_gene:HSFA2A,CC_gene:HSFA6b,CC_gene:HSFA2D,CC_gene:HSFA2C,CC_gene:HSFA2E,CC_gene:HSFA2B,CC_functional_completeness:complete,PRODUCT:Heat stress transcription factor A-2b,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr5+View
MA08G21050CC_gene:HSFA7A,CC_gene:HSF30,CC_gene:HSFA2A,CC_gene:HSFA6b,CC_gene:HSFA2D,CC_gene:HSFA2C,CC_gene:HSFA2E,CC_gene:HSFA2B,CC_functional_completeness:complete,PRODUCT:Heat stress transcription factor A-2b,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G08140heat stress transcription factor, putative, expressed Heat stress transcription factor A-2b7+View
OS03G58160heat stress transcription factor, putative, expressed Heat stress transcription factor A-2e3+View
OS10G28340Heat stress transcription factor A-2c heat stress transcription factor, putative, expressed10-View
OS03G53340HSF-type DNA-binding domain containing protein, expressed Heat stress transcription factor A-2a3-View
OS03G06630heat stress transcription factor, putative, expressed3+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_07G06410No description available.Chr07+View
OSINDICA_10G18950No description available.Chr10-View
OSINDICA_03G05720No description available.Chr03+View
OSINDICA_03G55510No description available.Chr03+View
OSINDICA_03G51350No description available.Chr03-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB02G004370No description available.chr_2+View
SB01G005250No description available.chr_1-View
SB01G046350No description available.chr_1-View
SB01G021490No description available.chr_1-View
SB01G008380No description available.chr_1+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G54790No description available.scaffold_9-View
SI009G05390No description available.scaffold_9-View
SI009G09410No description available.scaffold_9+View
SI002G04990No description available.scaffold_2+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G053950Heat stress transcription factor A-2c (AHRD V1 *-*- HFA2C_ORYSJ)ch06-View
SL09G065660Heat stress transcription factor A3 (AHRD V1 ***- D1M7W9_SOLLC)%3B contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type%2C DNA-bindingch09+View
SL09G082670Heat stress transcription factor A3 (AHRD V1 *-** D1M7W9_SOLLC)%3B contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type%2C DNA-bindingch09+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G05450name=GSVIVG01018041001;chr5+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G56000heat shock factor protein HSF301+View
ZM01G04340No description available.1+View
ZM01G44100heat shock factor protein HSF301-View


Download

Gene id
Species
Description
Chromosome
Strand