Anchorpoints

Gene id
PT10G06500
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G24320MUTL protein homolog 1 Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation. MUTL protein homolog 1 (MSH1); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, catalytic activity, ATP binding, nuclease activity; INVOLVED IN: mismatch repair, mitochondrial genome maintenance, mitochondrial DNA metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Serine/cysteine peptidase, trypsin-like (InterPro:IPR009003), DNA mismatch repair protein MutS, N-terminal (InterPro:IPR016151), Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS-like, N-terminal (InterPro:IPR007695); BEST Arabidopsis thaliana protein match is: MUTS homolog 6 (TAIR:AT4G02070.2); Has 14048 Blast hits to 12806 proteins in 2713 species: Archae - 218; Bacteria - 10179; Metazoa - 621; Fungi - 751; Plants - 393; Viruses - 3; Other Eukaryotes - 1883 (source: NCBI BLink).3-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00059G00140No description available.supercontig_59+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA08G13170CC_gene:depdc7,CC_gene:Gpr34,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G090870DNA mismatch repair protein mutS (AHRD V1 *-** C8PCK3_9LACO)%3B contains Interpro domain(s) IPR000432 DNA mismatch repair protein MutS%2C C-terminalch09-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G09090name=GSVIVG01027931001;chr5+View


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Gene id
Species
Description
Chromosome
Strand