Anchorpoints

Gene id
PT09G10370
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT04G14230No description available.Chr04-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G49630Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed in flower, leaf and root. Not expressed in silique and shoot. presequence protease 2 (PREP2); FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding; INVOLVED IN: proteolysis, protein maturation by peptide bond cleavage; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 1 (TAIR:AT3G19170.1); Has 3964 Blast hits to 3937 proteins in 1352 species: Archae - 7; Bacteria - 2621; Metazoa - 205; Fungi - 264; Plants - 79; Viruses - 0; Other Eukaryotes - 788 (source: NCBI BLink). presequence protease 21-View
AT3G19170presequence protease 1 presequence protease 1 (PREP1); FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: response to cadmium ion, proteolysis, protein maturation by peptide bond cleavage; LOCATED IN: mitochondrion, apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M16, C-terminal (InterPro:IPR007863), Peptidase M16C associated (InterPro:IPR013578), Peptidase M16, N-terminal (InterPro:IPR011765), Metalloenzyme, LuxS/M16 peptidase-like, metal-binding (InterPro:IPR011249), Peptidase M16, core (InterPro:IPR011237); BEST Arabidopsis thaliana protein match is: presequence protease 2 (TAIR:AT1G49630.2); Has 4222 Blast hits to 4196 proteins in 1321 species: Archae - 9; Bacteria - 2812; Metazoa - 224; Fungi - 268; Plants - 81; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink). Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers3-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G58166No description available.Bd3-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00062G00290No description available.supercontig_62-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G50650No description available.Chr02+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G033980No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G34200No description available.scaffold_1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G108600Presequence protease%2C mitochondrial (AHRD V1 **-- PREP_DANRE)%3B contains Interpro domain(s) IPR013578 Peptidase M16C associatedch01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G06920name=GSVIVG01031766001;chr3-View


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Gene id
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Description
Chromosome
Strand