Anchorpoints

Gene id
PT09G04650
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT10G18900No description available.Chr10+View
PT01G25170No description available.Chr01-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G58710rotamase CYP 7 (ROC7); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes cyclophilin ROC7. rotamase CYP 75+View
AT2G29960cyclophilin 5 cyclophilin 5 (CYP5); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cytosol, Golgi stack, endoplasmic reticulum, membrane fraction, multivesicular body; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 7 (TAIR:AT5G58710.1); Has 16420 Blast hits to 16390 proteins in 2652 species: Archae - 108; Bacteria - 6810; Metazoa - 2915; Fungi - 1388; Plants - 1273; Viruses - 4; Other Eukaryotes - 3922 (source: NCBI BLink). encodes a cyclophilin protein that exhibits peptidylprolyl cis/trans-isomerase and protein refolding activities that were sensitive to cyclosporin A. The protein interacts with GNOM in vitro and is localized to both the cytosolic and membrane fractions. The gene is expressed in the developing embryo.2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00019G01730No description available.supercontig_19+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G076970Peptidyl-prolyl cis-trans isomerase (AHRD V1 **** B2BF99_TOBAC)%3B contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-typech06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G10460name=GSVIVG01032820001;chr13-View
VV06G01790name=GSVIVG01024738001;chr6-View


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Gene id
Species
Description
Chromosome
Strand