Anchorpoints

Gene id
PT09G03270
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT01G24170No description available.Chr01+View
PT06G08660No description available.Chr06+View
PT10G20230No description available.Chr10-View
PT08G05740No description available.Chr08+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G07520GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G29065.1); Has 2426 Blast hits to 2385 proteins in 289 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 2411; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). GRAS family transcription factor1-View
AT3G46600GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G59450.1); Has 2508 Blast hits to 2402 proteins in 303 species: Archae - 0; Bacteria - 7; Metazoa - 2; Fungi - 0; Plants - 2499; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). GRAS family transcription factor3+View
AT5G59450GRAS family transcription factor GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G46600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View
AT2G29060GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: SCARECROW-like 14 (TAIR:AT1G07530.1); Has 4860 Blast hits to 2426 proteins in 308 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 0; Plants - 4833; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). GRAS family transcription factor2+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G03620No description available.Bd1-View
BD2G54670No description available.Bd2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00081G01280No description available.supercontig_81-View
CP00001G04110No description available.supercontig_1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA07G15470CC_gene:SCL5,CC_gene:SCL30,CC_gene:SCL11,CC_gene:SCL31,CC_gene:SCL34,CC_gene:SCL33,CC_gene:SCL14,CC_gene:SCL9,CC_functional_completeness:fragment,PRODUCT:Putative Scarecrow-like protein 9,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS12G38490SCARECROW, putative, expressed12+View
OS01G62460ZOS1-16 - C2H2 zinc finger protein, expressed1+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_12G26460No description available.Chr12+View
OSINDICA_05G00910No description available.Chr05-View
OSINDICA_11G34220No description available.Chr11+View
OSINDICA_01G59130No description available.Chr01+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G003110No description available.chr_1-View
SB03G039510No description available.chr_3+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G46720No description available.scaffold_9+View
SI003G06620No description available.scaffold_3+View
SI005G38590No description available.scaffold_5+View
SI009G03080No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G076280GRAS family transcription factor (AHRD V1 **-* B9HPF8_POPTR)%3B contains Interpro domain(s) IPR005202 GRAS transcription factorch06+View
SL09G010920GRAS family transcription factor (AHRD V1 **-* B9HBM9_POPTR)%3B contains Interpro domain(s) IPR005202 GRAS transcription factorch09+View
SL05G053090GRAS family transcription factor (AHRD V1 **-* B9HMJ2_POPTR)%3B contains Interpro domain(s) IPR005202 GRAS transcription factorch05-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G05140name=GSVIVG01016523001;chr13+View
VV06G03350name=GSVIVG01024933001;chr6+View
VV08G14430name=GSVIVG01034155001;chr8+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G57970No description available.1+View
ZM08G21530No description available.8+View
ZM03G27230No description available.3-View
ZM09G23850No description available.9+View
ZM01G11230No description available.1-View
ZM01G27110No description available.1+View


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Gene id
Species
Description
Chromosome
Strand