Anchorpoints

Gene id
PT09G00510
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT04G21670No description available.Chr04+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G28190Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Activation depends totally on CCS. Overexpression of a miR398-resistant form of CSD2 leads to more dramatic improvements in stress (hight light, Cu2+ and methyl viologen) tolerance than overexpression of wild-type CSD2. copper/zinc superoxide dismutase 2 copper/zinc superoxide dismutase 2 (CSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 1 (TAIR:AT1G08830.2); Has 4720 Blast hits to 4704 proteins in 1488 species: Archae - 6; Bacteria - 1989; Metazoa - 1257; Fungi - 323; Plants - 669; Viruses - 141; Other Eukaryotes - 335 (source: NCBI BLink).2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00001G00040No description available.supercontig_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G066390Superoxide dismutase [Cu-Zn], chloroplastic Superoxide dismutase (AHRD V1 ***- Q7XAV2_SOLLC)%3B contains Interpro domain(s) IPR018152 Superoxide dismutase%2C copper/zinc%2C binding sitech11+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G08800name=GSVIVG01031462001; Superoxide dismutase [Cu-Zn], chloroplasticchr6+View


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Gene id
Species
Description
Chromosome
Strand