Anchorpoints

Gene id
PT08G12490
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT10G11930No description available.Chr10-View
PT04G09540No description available.Chr04-View
PT17G11950No description available.Chr17+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G18220Phosphatidic acid phosphatase (PAP2) family protein Phosphatidic acid phosphatase (PAP2) family protein; FUNCTIONS IN: catalytic activity, phosphatidate phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 2 (TAIR:AT1G15080.1); Has 2090 Blast hits to 2085 proteins in 382 species: Archae - 5; Bacteria - 336; Metazoa - 902; Fungi - 401; Plants - 197; Viruses - 3; Other Eukaryotes - 246 (source: NCBI BLink).3+View
AT2G01180phosphatidic acid phosphatase 1 Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves. phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).2-View
AT1G15080lipid phosphate phosphatase 2 (LPP2); FUNCTIONS IN: acid phosphatase activity, phosphatidate phosphatase activity; INVOLVED IN: abscisic acid mediated signaling pathway; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.5); Has 2086 Blast hits to 2081 proteins in 377 species: Archae - 13; Bacteria - 320; Metazoa - 928; Fungi - 399; Plants - 199; Viruses - 3; Other Eukaryotes - 224 (source: NCBI BLink). Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals. lipid phosphate phosphatase 21+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G17600No description available.Bd2+View
BD2G47200No description available.Bd2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G04500No description available.supercontig_3-View
CP00170G00260No description available.supercontig_170-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G49820lipid phosphatase protein, putative, expressed1+View
OS05G47660lipid phosphatase protein, putative, expressed5-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G47160No description available.Chr01+View
OSINDICA_05G41860No description available.Chr05-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G031850No description available.chr_3+View
SB09G027540No description available.chr_9-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G28740No description available.scaffold_5+View
SI003G16020No description available.scaffold_3+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G086370ER Phosphatidate Phosphatase (AHRD V1 **** B9SJX0_RICCO)%3B contains Interpro domain(s) IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidasech02+View
SL05G008800Lipid phosphate phosphatase 3 (AHRD V1 **** B6SSC1_MAIZE)%3B contains Interpro domain(s) IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidasech05-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G07230name=GSVIVG01011832001;chr1+View
VV14G07720name=GSVIVG01030973001;chr14-View
VV17G06480name=GSVIVG01008347001;chr17-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM06G30290No description available.6-View
ZM08G25990No description available.8+View


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Gene id
Species
Description
Chromosome
Strand