PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: PT08G07780
Organism: Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
PT10G17980	No description available.	Chr10	-	View

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G65470	chromatin assembly factor-1 (FASCIATA1) (FAS1) Chromatin Assembly Factor-1 (CAF-1) p150 subunit. Mutants have reduced heterochromatin content. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. FASCIATA 1 (FAS1); CONTAINS InterPro DOMAIN/s: Chromatin assembly factor 1 subunit A (InterPro:IPR022043); Has 59418 Blast hits to 36461 proteins in 1994 species: Archae - 284; Bacteria - 7518; Metazoa - 24571; Fungi - 4236; Plants - 1982; Viruses - 348; Other Eukaryotes - 20479 (source: NCBI BLink).	1	-	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00088G00010	No description available.	supercontig_88	+	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS01G67100	expressed protein	1	+	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_01G63700	No description available.	Chr01	+	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
SB03G042580	No description available.	chr_3	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL11G008670	At1g65470/F5I14_33 (Fragment) (AHRD V1 -- Q9SXY0_ARATH)	ch11	+	View