Anchorpoints

Gene id
PT08G03820
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT16G09110Phenylalanine ammonia-lyaseChr16+View
PT10G22410No description available.Chr10+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G10340phenylalanine ammonia-lyase 4 phenylalanine ammonia-lyase 4 (PAL4); FUNCTIONS IN: ammonia-lyase activity, catalytic activity; INVOLVED IN: L-phenylalanine catabolic process, biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4898 Blast hits to 4876 proteins in 1415 species: Archae - 40; Bacteria - 2975; Metazoa - 80; Fungi - 127; Plants - 1177; Viruses - 0; Other Eukaryotes - 499 (source: NCBI BLink). Encodes PAL4, a putative a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).3+View
AT5G04230phenyl alanine ammonia-lyase 3 (PAL3); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: response to wounding, defense response; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 4 (TAIR:AT3G10340.1). Member of Phenylalanine ammonialyase (PAL) gene family. Differs significantly from PAL1 and PAL2 and other sequenced plant PAL genes. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). phenyl alanine ammonia-lyase 35+View
AT2G37040Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). PHE ammonia lyase 1 PHE ammonia lyase 1 (PAL1); FUNCTIONS IN: phenylalanine ammonia-lyase activity; INVOLVED IN: in 10 processes; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: phenylalanine ammonia-lyase 2 (TAIR:AT3G53260.1); Has 4888 Blast hits to 4867 proteins in 1414 species: Archae - 40; Bacteria - 2973; Metazoa - 79; Fungi - 127; Plants - 1176; Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink).2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G49250No description available.Bd3-View
BD5G15830No description available.Bd5-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G09380CC_gene:PAL3,CC_gene:PAL1,CC_gene:PAL6,CC_gene:PAL,CC_functional_completeness:complete,PRODUCT:Phenylalanine ammonia-lyase,GO:0016841,GO:0009058,GO:0006559,GO:0005737,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:4.3.1.5chr1+View
MA08G19480CC_gene:PAL3,CC_gene:PALA,CC_gene:PAL,CC_gene:PAL1,CC_functional_completeness:complete,PRODUCT:Phenylalanine ammonia-lyase 1,GO:0016841,GO:0009058,GO:0006559,GO:0005737,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:4.3.1.5chr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G43760phenylalanine ammonia-lyase, putative, expressed4-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_04G35870No description available.Chr04-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB06G022740No description available.chr_6-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI007G17490No description available.scaffold_7-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G056170Phenylalanine ammonia-lyase (AHRD V1 **** Q50EX7_PETHY)%3B contains Interpro domain(s) IPR005922 Phenylalanine ammonia-lyasech05+View
SL09G007890Phenylalanine ammonia-lyase (AHRD V1 **** B5LAW0_CAPAN)%3B contains Interpro domain(s) IPR005922 Phenylalanine ammonia-lyasech09-View
SL10G086180Phenylalanine ammonia-lyase (AHRD V1 ***- D2CFQ1_9SOLA)%3B contains Interpro domain(s) IPR005922 Phenylalanine ammonia-lyasech10+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G05610name=GSVIVG01025214001;chr6-View
VV13G02990name=GSVIVG01016257001;chr13+View
VV08G03020name=GSVIVG01025703001;chr8-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G09920phenylalanine ammonia-lyase2+View


Download

Gene id
Species
Description
Chromosome
Strand