Anchorpoints

Gene id
PT07G13780
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT17G01380No description available.Chr17+View
PT00G00270No description available.scaffold_139+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G28410Tyrosine transaminase family protein Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT2G20610.1); Has 36818 Blast hits to 36812 proteins in 2952 species: Archae - 883; Bacteria - 26284; Metazoa - 751; Fungi - 692; Plants - 1240; Viruses - 0; Other Eukaryotes - 6968 (source: NCBI BLink).4+View
AT2G20610Tyrosine transaminase family protein Confers auxin overproduction. Mutants have an over-proliferation of lateral roots. Encodes a C-S lyase involved in converting S-alkylthiohydroximate to thiohydroximate in glucosinolate biosynthesis. SUPERROOT 1 (SUR1); FUNCTIONS IN: S-alkylthiohydroximate lyase activity, carbon-sulfur lyase activity, transaminase activity; INVOLVED IN: regulation of cell growth by extracellular stimulus, glucosinolate biosynthetic process, adventitious root development, indoleacetic acid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT4G28420.2); Has 40950 Blast hits to 40944 proteins in 3034 species: Archae - 1011; Bacteria - 29323; Metazoa - 781; Fungi - 784; Plants - 1326; Viruses - 0; Other Eukaryotes - 7725 (source: NCBI BLink).2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00083G00800No description available.supercontig_83+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G053710Tyrosine aminotransferase (AHRD V1 **** D3K4J1_PAPSO)%3B contains Interpro domain(s) IPR005958 Tyrosine/nicotianamine aminotransferasech07-View
SL10G008200Tyrosine aminotransferase (AHRD V1 **** D3K4J1_PAPSO)%3B contains Interpro domain(s) IPR005958 Tyrosine/nicotianamine aminotransferasech10-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G01940name=GSVIVG01020594001;chr12-View


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Gene id
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Description
Chromosome
Strand