Anchorpoints

Gene id
PT07G04230
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT09G10360No description available.Chr09-View
PT04G14210No description available.Chr04-View
PT05G13750No description available.Chr05+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G50630KIP-related protein 2 Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Gene was isolated from a yeast two hybrid screen as an interacting protein of CDC2A. Recombinant protein has a strong kinase inhibitor activity in vitro. Transcript is expressed in all tissues examined but is differentially distributed from ICK1. Controls the onset of the endoreduplication cycle through inhibition of CDKA;1. The KRP2 protein abundance is regulated by proteolysis through CDKB1;1 phosphorylation. KIP-related protein 2 (KRP2); FUNCTIONS IN: protein binding, kinase inhibitor activity, cyclin-dependent protein kinase inhibitor activity; INVOLVED IN: negative regulation of cyclin-dependent protein kinase activity, DNA endoreduplication; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); Has 103 Blast hits to 103 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 97; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).3+View
AT2G23430ICK1; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: KIP-related protein 2 (TAIR:AT3G50630.1); Has 507 Blast hits to 479 proteins in 88 species: Archae - 0; Bacteria - 19; Metazoa - 119; Fungi - 13; Plants - 208; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink). Encodes a cyclin-dependent kinase inhibitor protein that functions as a negative regulator of cell division and promoter of endoreduplication. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Both SKP2b and RKP appear to be involved in the degradation of KRP1. Cyclin-dependent kinase inhibitor family protein2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD4G32265No description available.Bd4-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00055G01660No description available.supercontig_55-View
CP00062G00280No description available.supercontig_62-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_09G22880No description available.Chr09-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G044480No description available.ch03-View
SL02G090680Cyclin-dependent kinase inhibitor 7 (AHRD V1 *-** KRP7_ARATH)%3B contains Interpro domain(s) IPR016701 Cyclin-dependent kinase inhibitor%2C plantch02+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G06910name=GSVIVG01031765001;chr3-View
VV07G05650name=GSVIVG01022145001;chr7-View


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Gene id
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Description
Chromosome
Strand