PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: PT06G17850
Organism: Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
PT18G10040	No description available.	Chr18	+	View

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT4G30440	UDP-D-glucuronate 4-epimerase UDP-D-glucuronate 4-epimerase 1 (GAE1); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43669 Blast hits to 43658 proteins in 3000 species: Archae - 796; Bacteria - 26151; Metazoa - 773; Fungi - 435; Plants - 1177; Viruses - 35; Other Eukaryotes - 14302 (source: NCBI BLink). UDP-D-glucuronate 4-epimerase 1	4	-	View

Brachypodium distachyon

Gene id	Description	Chromosome	Strand	Multiplicon
BD3G53830	No description available.	Bd3	+	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA03G04920	CC_gene:capI,CC_gene:GAE6,CC_gene:GAE5,CC_gene:GAE4,CC_gene:GAE3,CC_gene:GAE2,CC_gene:GAE1,CC_functional_completeness:complete,PRODUCT:UDP-glucuronate 4-epimerase 1,GO:0050662,GO:0044237,GO:0008152,GO:0005975,GO:0005488,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:5.1.3.12	chr3	+	View
MA05G04850	CC_gene:MJ1055,CC_gene:GAE4,CC_gene:GAE6,CC_gene:GAE2,CC_gene:GAE3,CC_gene:GAE5,CC_gene:GAE1,CC_functional_completeness:modules,PRODUCT:Putative uncharacterized protein,GO:0050662,GO:0044237,GO:0008152,GO:0005488,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:5.1.3.2	chr5	+	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS02G54890	UDP-glucuronate 4-epimerase, putative, expressed	2	+	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_02G53120	No description available.	Chr02	+	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
SB04G035630	No description available.	chr_4	+	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI001G36260	No description available.	scaffold_1	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL07G006220	UDP-D-glucuronate 4-epimerase 1 (AHRD V1 **** D7MBW0_ARALY)%3B contains Interpro domain(s) IPR016040 NAD(P)-binding domain	ch07	-	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM05G42940	No description available.	5	+	View