Anchorpoints

Gene id
PT06G14740
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G72740Homeodomain-like/winged-helix DNA-binding family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: nucleosome assembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Histone H1/H5 (InterPro:IPR005818), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like/winged-helix DNA-binding family protein (TAIR:AT1G17520.1); Has 801 Blast hits to 789 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 83; Fungi - 63; Plants - 602; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). Homeodomain-like/winged-helix DNA-binding family protein1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G040920Single myb histone (AHRD V1 **-* B9N5F4_POPTR)%3B contains Interpro domain(s) IPR005818 Histone H1/H5ch07-View
SL03G121840Histone H1-like protein (AHRD V1 *-*- Q8W119_MAIZE)%3B contains Interpro domain(s) IPR005818 Histone H1/H5ch03-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G03290name=GSVIVG01015170001;chr11+View


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Gene id
Species
Description
Chromosome
Strand