Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT06G10600
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G08840 | D-alanine--D-alanine ligase family D-alanine--D-alanine ligase family; FUNCTIONS IN: D-alanine-D-alanine ligase activity, catalytic activity, ATP binding; INVOLVED IN: peptidoglycan biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-alanine--D-alanine ligase/VANA/B/C, conserved site (InterPro:IPR000291), D-alanine--D-alanine ligase, C-terminal (InterPro:IPR011095), PreATP-grasp-like fold (InterPro:IPR016185), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Pre-ATP-grasp fold (InterPro:IPR013817), D-alanine--D-alanine ligase, N-terminal (InterPro:IPR011127); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | 3 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G16770 | No description available. | Bd1 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA09G04860 | CC_gene:ddl,CC_functional_completeness:modules,PRODUCT:Putative D-alanine--D-alanine ligase,GO:0009252,GO:0008716,GO:0005618,GO:0005524,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:6.3.2.4 | chr9 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL09G015130 | D-alanine--D-alanine ligase family (AHRD V1 ***- D7L782_ARALY)%3B contains Interpro domain(s) IPR013816 ATP-grasp fold%2C subdomain 2 | ch09 | + | View |
| SL10G085390 | D-alanine--D-alanine ligase family (AHRD V1 ***- D7L782_ARALY)%3B contains Interpro domain(s) IPR013817 Pre-ATP-grasp fold | ch10 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV08G06250 | name=GSVIVG01030240001; | chr8 | - | View |