Anchorpoints

Gene id
PT05G23270
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT02G03000No description available.Chr02+View
PT07G01800No description available.Chr07+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G19730encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. ATTRX4; FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: cell redox homeostasis; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin H-type 5 (TAIR:AT1G45145.1); Has 19449 Blast hits to 19098 proteins in 2963 species: Archae - 279; Bacteria - 10803; Metazoa - 1859; Fungi - 973; Plants - 1850; Viruses - 7; Other Eukaryotes - 3678 (source: NCBI BLink). Thioredoxin superfamily protein1-View
AT1G45145thioredoxin H-type 5 thioredoxin H-type 5 (TRX5); FUNCTIONS IN: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: response to oxidative stress, response to cadmium ion, defense response to fungus, response to microbial phytotoxin; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: thioredoxin 3 (TAIR:AT5G42980.1); Has 18724 Blast hits to 18448 proteins in 2947 species: Archae - 261; Bacteria - 10598; Metazoa - 1825; Fungi - 834; Plants - 1766; Viruses - 10; Other Eukaryotes - 3430 (source: NCBI BLink). encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G01850No description available.supercontig_6-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G084710Thioredoxin h1 (AHRD V1 ***- A8HTK0_SOYBN)%3B contains Interpro domain(s) IPR015467 Thioredoxin%2C corech02+View
SL04G080850Thioredoxin (AHRD V1 ***- Q201Z4_9SOLN)%3B contains Interpro domain(s) IPR015467 Thioredoxin%2C corech04-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G09620name=GSVIVG01009792001;chr18-View
VV04G01300name=GSVIVG01018852001;chr4-View


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Gene id
Species
Description
Chromosome
Strand