Anchorpoints

Gene id
PT05G21980
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT08G16230No description available.Chr08+View
PT02G04310No description available.Chr02-View
PT13G04270No description available.Chr13+View
PT10G07680No description available.Chr10-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G06760winged-helix DNA-binding transcription factor family protein winged-helix DNA-binding transcription factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Histone H5 (InterPro:IPR005819), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT2G30620.1); Has 20265 Blast hits to 10904 proteins in 1494 species: Archae - 37; Bacteria - 8386; Metazoa - 4718; Fungi - 1128; Plants - 980; Viruses - 120; Other Eukaryotes - 4896 (source: NCBI BLink).1-View
AT2G30620winged-helix DNA-binding transcription factor family protein winged-helix DNA-binding transcription factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, nucleus, nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Histone H5 (InterPro:IPR005819), Histone H1/H5 (InterPro:IPR005818); BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT1G06760.1); Has 19743 Blast hits to 11193 proteins in 1486 species: Archae - 45; Bacteria - 7849; Metazoa - 5019; Fungi - 1189; Plants - 983; Viruses - 143; Other Eukaryotes - 4515 (source: NCBI BLink).2+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G05330No description available.Bd1-View
BD1G55260No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00052G01390No description available.supercontig_52+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA05G03350CC_gene:At1g06760,CC_gene:H1-I,CC_gene:At2g30620,CC_functional_completeness:modules,PRODUCT:Histone-like protein (Fragment),GO:0006334,GO:0005634,GO:0003677,GO:0000786,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G08710AT hook-containing DNA-binding protein, putative, expressed7+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G55790No description available.Chr03+View
OSINDICA_07G06970No description available.Chr07+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G005010No description available.chr_1-View
SB02G004730No description available.chr_2+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI002G05780No description available.scaffold_2+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G066100Histone H1 (AHRD V1 *-*- Q40509_TOBAC)%3B contains Interpro domain(s) IPR005818 Histone H1/H5 Histone H1ch09+View
SL09G083380Histone H1 (AHRD V1 *-*- B6TC95_MAIZE)%3B contains Interpro domain(s) IPR005818 Histone H1/H5ch09-View
SL06G084020Histone H1 (AHRD V1 *-*- O65820_SOLLC)%3B contains Interpro domain(s) IPR005818 Histone H1/H5ch06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G14890name=GSVIVG01036230001;chr14-View
VV05G06020name=GSVIVG01018114001;chr5+View
VV07G01750name=GSVIVG01000755001;chr7+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G56300Histone H11+View


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Gene id
Species
Description
Chromosome
Strand