Anchorpoints

Gene id
PT05G12190
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT04G15600No description available.Chr04+View
PT07G02360No description available.Chr07-View
PT09G11730No description available.Chr09+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G36540BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.2); Has 2056 Blast hits to 2048 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 31; Plants - 2000; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). BR enhanced expression 24+View
AT2G18300basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cytokinin stimulus, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 2 (TAIR:AT4G36540.1). basic helix-loop-helix (bHLH) DNA-binding superfamily protein2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G52790No description available.Bd3-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G01270No description available.supercontig_6+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G47660basic helix-loop-helix, putative, expressed2-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G45940No description available.Chr02-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G030530No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G30090No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G109700Transcription factor (AHRD V1 *-** D6MKM4_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingch01+View
SL03G034000Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingch03-View
SL02G062690Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingch02-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G02030name=GSVIVG01018942001;chr4+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G22200No description available.4-View
ZM05G37950No description available.5-View


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Gene id
Species
Description
Chromosome
Strand