Anchorpoints
- Gene id
- PT05G12190
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT04G15600 | No description available. | Chr04 | + | View |
PT07G02360 | No description available. | Chr07 | - | View |
PT09G11730 | No description available. | Chr09 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G36540 | BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.2); Has 2056 Blast hits to 2048 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 31; Plants - 2000; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). BR enhanced expression 2 | 4 | + | View |
AT2G18300 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cytokinin stimulus, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 2 (TAIR:AT4G36540.1). basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 2 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD3G52790 | No description available. | Bd3 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00006G01270 | No description available. | supercontig_6 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G47660 | basic helix-loop-helix, putative, expressed | 2 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_02G45940 | No description available. | Chr02 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB04G030530 | No description available. | chr_4 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI001G30090 | No description available. | scaffold_1 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G109700 | Transcription factor (AHRD V1 *-** D6MKM4_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | ch01 | + | View |
SL03G034000 | Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | ch03 | - | View |
SL02G062690 | Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | ch02 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV04G02030 | name=GSVIVG01018942001; | chr4 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM04G22200 | No description available. | 4 | - | View |
ZM05G37950 | No description available. | 5 | - | View |