PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: PT05G05610
Organism: Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
PT13G04300	No description available.	Chr13	+	View

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT3G04610	RNA-binding KH domain-containing protein flowering locus KH domain (FLK); FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: positive regulation of flower development; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26000.1); Has 8156 Blast hits to 5360 proteins in 381 species: Archae - 0; Bacteria - 269; Metazoa - 3587; Fungi - 776; Plants - 1209; Viruses - 216; Other Eukaryotes - 2099 (source: NCBI BLink).	3	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS03G42900	KH domain containing protein, putative, expressed	3	+	View
OS12G40560	KH domain containing protein, putative, expressed	12	+	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_03G41310	No description available.	Chr03	+	View
OSINDICA_12G28540	No description available.	Chr12	+	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
SB01G014196	No description available.	chr_1	-	View
SB08G020260	No description available.	chr_8	+	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI009G16840	No description available.	scaffold_9	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL09G066120	Nucleic acid binding protein (AHRD V1 **** B6U2B4_MAIZE)%3B contains Interpro domain(s) IPR018111 K Homology%2C type 1%2C subgroup	ch09	+	View
SL01G097010	Nucleic acid binding protein (AHRD V1 *- B6U2B4_MAIZE)%3B contains Interpro domain(s) IPR018111 K Homology%2C type 1%2C subgroup	ch01	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV14G14930	name=GSVIVG01036237001;	chr14	-	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM01G28650	KH domain containing protein	1	+	View
ZM05G07650	nucleic acid binding protein	5	+	View